STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_009717RNA binding protein. (249 aa)    
Predicted Functional Partners:
AARAC_011877
Microfibrillar-associated protein MfaP1.
   
 0.995
AARAC_000405
FF domain protein.
   
 0.989
AARAC_010496
C2H2 finger domain protein.
   
 0.982
AARAC_007657
Uncharacterized protein.
   
 0.966
AARAC_010330
Ubiquitin-like protein (HubA).
    
 0.945
AARAC_007472
Ubiquitin-like domain-containing protein.
    
 0.945
AARAC_010377
Pre-mRNA-processing-splicing factor 8.
    
 
 0.930
AARAC_008241
ATP dependent DNA ligase domain protein.
   
 
 0.919
AARAC_009673
Putative mRNA splicing factor (Prp1/Zer1).
   
 0.904
AARAC_002612
U1 zinc finger domain protein.
   
 0.899
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.