STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_006028Cell division control protein Cdc4. (1001 aa)    
Predicted Functional Partners:
AARAC_009355
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
 0.998
AARAC_007037
E3 ubiquitin-protein ligase RBX1.
    
 0.996
AARAC_001283
Cell division control protein; Belongs to the CDC6/cdc18 family.
    
 0.992
AARAC_006590
Cullin; Belongs to the cullin family.
    
 0.992
AARAC_010135
Uncharacterized protein.
    
 0.972
AARAC_007708
Ubiquitin conjugating enzyme (UbcC); Belongs to the ubiquitin-conjugating enzyme family.
    
 0.925
AARAC_008346
F-box and WD repeat-containing protein.
  
  
 
0.901
AARAC_007874
Cullin-3; Belongs to the cullin family.
    
 0.871
AARAC_006211
Sulfur metabolite repression control protein.
  
  
 
0.864
AARAC_003482
Ubiquitin-like protein 1.
    
 0.843
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.