STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_003858Gibberellin 20-oxidase family protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (318 aa)    
Predicted Functional Partners:
AARAC_002380
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
   
 0.668
AARAC_005538
Autophagy-related protein 17.
    
 0.652
AARAC_005683
Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
   
 0.452
AARAC_002010
Gibberellin 2-oxidase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.451
AARAC_002005
Gibberellin 2-oxidase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.444
AARAC_007762
Gibberellin 20-oxidase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.434
AARAC_000643
Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.414
AARAC_001041
Leucoanthocyanidin dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.414
AARAC_007493
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.400
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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