STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_007227Phytoene synthase. (560 aa)    
Predicted Functional Partners:
AARAC_007226
Phytoene dehydrogenase.
 
 0.994
AARAC_008239
Geranyltranstransferase; Belongs to the FPP/GGPP synthase family.
  
 0.939
AARAC_004251
Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.931
AARAC_006611
Farnesyltranstransferase; Belongs to the FPP/GGPP synthase family.
  
 0.931
AARAC_000095
Farnesyltranstransferase; Belongs to the FPP/GGPP synthase family.
  
 0.924
AARAC_008744
Uncharacterized protein.
   
 
 0.915
AARAC_001190
Geranylgeranyl diphosphate synthase.
  
 0.912
AARAC_000515
Geranylgeranyl pyrophosphate synthase.
  
 0.912
AARAC_005321
Dioxygenase.
     
 0.904
AARAC_010869
Dioxygenase.
     
 0.904
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.