STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_001621Transformer-SR ribonucleoprotein. (313 aa)    
Predicted Functional Partners:
AARAC_001622
RRM domain-containing protein.
  
 0.869
AARAC_011432
Pre-mRNA splicing factor (Srp1).
    
 0.838
AARAC_003214
RNA binding domain protein.
   
 0.794
AARAC_011173
RNA-binding protein rnc1.
   
 0.793
AARAC_002394
KH domain RNA binding protein.
   
 0.793
AARAC_005974
Glycine-rich RNA-binding protein.
  
0.789
AARAC_003445
Nuclear cap-binding protein subunit 2.
   
 0.788
AARAC_011596
snRNA cap binding complex subunit (Gcr3).
    
 0.770
AARAC_011244
PWI domain mRNA processing protein.
   
 0.759
AARAC_007225
Rna-binding protein.
   
 0.758
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.