STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_011374L-xylulose reductase. (293 aa)    
Predicted Functional Partners:
AARAC_003741
Zinc-dependent alcohol dehydrogenase.
   
 
 0.880
AARAC_011554
Alcohol dehydrogenase.
   
 
  0.872
AARAC_005135
L-arabitol dehydrogenase.
   
 
  0.872
AARAC_006799
L-arabitol dehydrogenase.
   
 
  0.872
AARAC_004559
L-xylulose reductase.
  
  
 
0.870
AARAC_002347
D-xylulose reductase A.
   
 
  0.869
AARAC_009883
Oxidoreductase.
  
  
 
0.867
AARAC_007131
Alcohol dehydrogenase.
   
 
 0.859
AARAC_000517
Short-chain dehydrogenase.
  
  
 
0.819
AARAC_007364
SCA7 domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.575
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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