STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_000910Uncharacterized protein. (317 aa)    
Predicted Functional Partners:
AARAC_000909
Iron-sulfur cluster-binding protein.
 
     0.718
AARAC_007201
C6 transcription factor.
     
 0.620
AARAC_001278
Peroxisome biosynthesis protein (Peroxin-10).
     
 0.606
AARAC_011161
Peroxisomal membrane protein (Pex13).
     
 0.606
AARAC_009654
Peroxisomal membrane protein (Pex3).
     
 0.591
AARAC_010840
Peroxisomal membrane protein PEX16.
     
 0.559
AARAC_003576
Nuclear serine protease HtrA2/Nma111.
    
  0.521
AARAC_002773
Rieske 2Fe-2S family protein.
 
  
  0.497
AARAC_006969
RNA polymerase I specific transcription initiation factor Rrn7.
   
 
  0.483
AARAC_007257
Peroxisomal membrane protein (PmpP24).
     
 0.457
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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