AARAC_000470 protein (Aspergillus arachidicola)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AARAC_000470

Uncharacterized protein. (1201 aa)

Predicted Functional Partners:

AARAC_004492

0.782

AARAC_007530

0.756

AARAC_004880

0.673

AARAC_003090

0.673

AARAC_001115

0.560

AARAC_007692

0.560

AARAC_000240

0.553

AARAC_009989

0.553

AARAC_007542

0.553

AARAC_005059

0.553

Your Current Organism:

Aspergillus arachidicola

NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AARAC_000240	AARAC_000470	A0A2G7FN46	A0A2G7G729	Chitin deacetylase.	Uncharacterized protein.	0.553
AARAC_000240	AARAC_003090	A0A2G7FN46	A0A2G7FU77	Chitin deacetylase.	Ankyrin 2.	0.818
AARAC_000240	AARAC_004492	A0A2G7FN46	A0A2G7FZD2	Chitin deacetylase.	Uncharacterized protein.	0.607
AARAC_000240	AARAC_004880	A0A2G7FN46	A0A2G7FP82	Chitin deacetylase.	Ankyrin repeat-containing protein.	0.818
AARAC_000240	AARAC_007530	A0A2G7FN46	A0A2G7G0P8	Chitin deacetylase.	MHYT domain signaling protein.	0.931
AARAC_000240	AARAC_007542	A0A2G7FN46	A0A2G7G0Q9	Chitin deacetylase.	Polysaccharide deacetylase (NodB).	0.580
AARAC_000470	AARAC_000240	A0A2G7G729	A0A2G7FN46	Uncharacterized protein.	Chitin deacetylase.	0.553
AARAC_000470	AARAC_001115	A0A2G7G729	A0A2G7FS32	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.560
AARAC_000470	AARAC_003090	A0A2G7G729	A0A2G7FU77	Uncharacterized protein.	Ankyrin 2.	0.673
AARAC_000470	AARAC_004492	A0A2G7G729	A0A2G7FZD2	Uncharacterized protein.	Uncharacterized protein.	0.782
AARAC_000470	AARAC_004880	A0A2G7G729	A0A2G7FP82	Uncharacterized protein.	Ankyrin repeat-containing protein.	0.673
AARAC_000470	AARAC_005059	A0A2G7G729	A0A2G7GA78	Uncharacterized protein.	Endoglucanase.	0.553
AARAC_000470	AARAC_007530	A0A2G7G729	A0A2G7G0P8	Uncharacterized protein.	MHYT domain signaling protein.	0.756
AARAC_000470	AARAC_007542	A0A2G7G729	A0A2G7G0Q9	Uncharacterized protein.	Polysaccharide deacetylase (NodB).	0.553
AARAC_000470	AARAC_007692	A0A2G7G729	A0A2G7FSZ3	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.560
AARAC_000470	AARAC_009989	A0A2G7G729	A0A2G7FXJ0	Uncharacterized protein.	Chitin deacetylase.	0.553
AARAC_001115	AARAC_000470	A0A2G7FS32	A0A2G7G729	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.560
AARAC_001115	AARAC_003090	A0A2G7FS32	A0A2G7FU77	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Ankyrin 2.	0.925
AARAC_001115	AARAC_004880	A0A2G7FS32	A0A2G7FP82	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Ankyrin repeat-containing protein.	0.925
AARAC_001115	AARAC_007692	A0A2G7FS32	A0A2G7FSZ3	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.891