STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_002583DNA repair protein (Rad1); Belongs to the complex I LYR family. (282 aa)    
Predicted Functional Partners:
AARAC_002832
Isoflavone reductase family protein.
    
 0.787
AARAC_010855
MADS box transcription factor Mcm1.
    
 0.726
AARAC_008393
RSC complex subunit Sfh1.
    
 0.572
AARAC_002534
Calcium channel subunit Cch1.
    
 0.557
AARAC_011972
Sexual development transcription factor NsdD.
    
 0.526
AARAC_004157
Uncharacterized protein.
    
 0.526
AARAC_005648
GATA transcription factor (AreB).
    
 0.526
AARAC_007524
GATA factor SREP.
    
 0.526
AARAC_009214
Clock controled protein (Ccg-8).
    
 0.526
AARAC_010443
Nitrogen regulatory protein areA.
    
 0.526
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.