STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_003186Uncharacterized protein. (120 aa)    
Predicted Functional Partners:
AARAC_011687
Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.
   
 0.967
AARAC_000385
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.
    
 0.964
AARAC_005462
Autophagy-related protein 18.
   
 0.957
AARAC_000788
Autophagy-related protein 3.
   
 0.916
AARAC_007974
Serine/threonine protein kinase (Pdd7p).
    
 
 0.908
AARAC_007029
Lipase atg15.
   
 
 0.895
AARAC_008802
Anucleate primary sterigmata (ApsB).
    
 0.856
AARAC_008201
Autophagy-related protein.
    
 0.818
AARAC_008520
MYND-type domain-containing protein.
    
 0.796
AARAC_007206
Autophagy protein Apg6.
    
 0.796
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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