STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_003370ATP-dependent RNA helicase sub2. (441 aa)    
Predicted Functional Partners:
AARAC_008048
Putative RNA annealing protein Yra1.
   
 0.999
AARAC_001159
Cell cycle control protein (Cwf22).
   
 0.990
AARAC_011408
Arsenite resistance protein Ars2.
 
 
 0.990
AARAC_000226
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
  0.987
AARAC_001387
ATP dependent RNA helicase (Dob1).
    
 0.987
AARAC_003498
Pre-mRNA-splicing factor slu7.
   
 0.987
AARAC_004991
Nonsense-mediated mRNA decay protein Upf3.
    
 0.986
AARAC_010852
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
  0.985
AARAC_006950
Peptidyl-prolyl cis-trans isomerase-like 2.
   
  0.985
AARAC_011205
Pre-mRNA-splicing factor syf2.
   
 0.985
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.