STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_006363PH domain protein. (538 aa)    
Predicted Functional Partners:
AARAC_011474
Mitochondrial 54S ribosomal protein YmL10/YmL18.
   
 
 0.874
AARAC_010335
Ribosomal protein S15.
  
 
 0.839
AARAC_011188
Mitochondrial 37S ribosomal protein MRP2.
   
 
 0.832
AARAC_008380
Mitochondrial 54S ribosomal protein YmL9; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.805
AARAC_006262
Mitochondrial translation initiation factor.
  
 0.803
AARAC_009054
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.794
AARAC_005481
Mitochondrial 54S ribosomal protein YmL19; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.783
AARAC_004436
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.766
AARAC_007259
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.744
AARAC_009638
Mitochondrial 54S ribosomal protein YmL7/YmL5.
   
 
 0.740
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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