STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_004056Exosome complex endonuclease 2/ribosomal RNA processing protein. (292 aa)    
Predicted Functional Partners:
AARAC_010850
RNase_PH domain-containing protein.
   
 0.999
AARAC_002179
RNase_PH domain-containing protein.
   
 0.999
AARAC_006928
Exosome complex subunit Csl4.
   
 0.999
AARAC_010553
Exosome complex subunit Rrp46.
   
 0.999
AARAC_008815
Exosome complex component rrp4.
   
 0.999
AARAC_007011
Exosome complex exonuclease Rrp40.
   
 0.999
AARAC_003412
Exosome complex endonuclease 1.
   
 0.999
AARAC_007748
Exosome complex exonuclease DIS3; Belongs to the RNR ribonuclease family.
   
 0.997
AARAC_005745
Exosome-associated protein.
   
 0.996
AARAC_005863
Putative phosphoenolpyruvate phosphomutase.
   
 0.996
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.