STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARAC_007146Uncharacterized protein. (653 aa)    
Predicted Functional Partners:
AARAC_005424
DNA polymerase delta subunit 2.
    
 0.665
AARAC_009733
DNA repair protein Mus81.
    
 0.592
AARAC_010458
DNA polymerase.
   
 0.562
AARAC_008834
SMN domain-containing protein.
    
 0.554
AARAC_007917
RanBP1 domain protein.
    
  0.540
AARAC_001716
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
  0.529
AARAC_009466
DNA repair protein RAD1.
    
 0.528
AARAC_005395
NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
   0.527
AARAC_004594
Calcium dependent mitochondrial carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
   0.526
AARAC_002956
Histone acetyltransferase type B subunit 2.
    
  0.525
Your Current Organism:
Aspergillus arachidicola
NCBI taxonomy Id: 656916
Other names: A. arachidicola, Aspergillus arachidicola Pildain, Frisvad & Samson, 2008, Aspergillus sp. JV-2007b, CBS 117610
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