STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKF35848.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (576 aa)    
Predicted Functional Partners:
KKF35849.1
Portal vertex protein; gpQ; Q protein; structural capsid protein; bacteriophage P2-like virions include a head and a tail; Q is a connector or portal protein that joins phage head and tail; Q, P and M proteins are needed to package DNA into proheads and for the conversion of proheads to capsids; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.976
KKF35847.1
Phage capsid scaffolding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.956
KKF35846.1
Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.953
KKF35844.1
Capsid assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.951
KKF35845.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.949
KKF35843.1
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.937
KKF35836.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.935
KKF35839.1
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.933
KKF35838.1
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.921
KKF34445.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.914
Your Current Organism:
Erwinia tracheiphila
NCBI taxonomy Id: 65700
Other names: ATCC 33245, Bacillus tracheiphilus, Bacterium tracheiphilus, CFBP 2355, CIP 105205, DSM 21139, E. tracheiphila, Erwinia amylovora var. tracheiphila, ICMP 5845, LMG 2707, LMG 2906, LMG:2707, LMG:2906, NCPPB 2452
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