Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KKF35344.1 | KKF37580.1 | SY86_07825 | SY86_22760 | Nucleoside permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 0.416 |
| KKF35344.1 | thiC | SY86_07825 | SY86_17555 | Nucleoside permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.452 |
| KKF35687.1 | KKF37580.1 | SY86_10050 | SY86_22760 | NADH:flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 0.597 |
| KKF37580.1 | KKF35344.1 | SY86_22760 | SY86_07825 | Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Nucleoside permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.416 |
| KKF37580.1 | KKF35687.1 | SY86_22760 | SY86_10050 | Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | NADH:flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.597 |
| KKF37580.1 | rnfA | SY86_22760 | SY86_03490 | Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Electron transporter RsxA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.703 |
| KKF37580.1 | rnfB | SY86_22760 | SY86_03495 | Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Electron transporter RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.462 |
| KKF37580.1 | rnfD | SY86_22760 | SY86_03505 | Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Electron transporter RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | 0.712 |
| KKF37580.1 | rnfE | SY86_22760 | SY86_03515 | Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Elongation factor G; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.701 |
| KKF37580.1 | rnfG | SY86_22760 | SY86_03510 | Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Electron transporter RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family. | 0.496 |
| KKF37580.1 | thiC | SY86_22760 | SY86_17555 | Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.402 |
| rnfA | KKF37580.1 | SY86_03490 | SY86_22760 | Electron transporter RsxA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 0.703 |
| rnfA | rnfB | SY86_03490 | SY86_03495 | Electron transporter RsxA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Electron transporter RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.999 |
| rnfA | rnfD | SY86_03490 | SY86_03505 | Electron transporter RsxA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Electron transporter RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | 0.995 |
| rnfA | rnfE | SY86_03490 | SY86_03515 | Electron transporter RsxA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Elongation factor G; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.988 |
| rnfA | rnfG | SY86_03490 | SY86_03510 | Electron transporter RsxA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Electron transporter RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family. | 0.994 |
| rnfB | KKF37580.1 | SY86_03495 | SY86_22760 | Electron transporter RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 0.462 |
| rnfB | rnfA | SY86_03495 | SY86_03490 | Electron transporter RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | Electron transporter RsxA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.999 |
| rnfB | rnfD | SY86_03495 | SY86_03505 | Electron transporter RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | Electron transporter RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family. | 0.994 |
| rnfB | rnfE | SY86_03495 | SY86_03515 | Electron transporter RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | Elongation factor G; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.994 |
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