STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP61987.1Hypothetical protein. (118 aa)    
Predicted Functional Partners:
SEP61844.1
Phage portal protein.
       0.788
SEP61874.1
Hypothetical protein.
       0.773
SEP61902.1
Hypothetical protein.
       0.773
SEP61932.1
Phage major capsid protein, HK97 family.
       0.773
SEP61958.1
HNH endonuclease.
       0.773
SEP62015.1
Phage terminase-like protein, large subunit, contains N-terminal HTH domain.
       0.773
SEP62041.1
AAA domain-containing protein.
       0.446
SEP62065.1
Primase C terminal 2 (PriCT-2).
       0.446
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.