STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP62397.1Peptide/nickel transport system permease protein. (364 aa)    
Predicted Functional Partners:
SEP62373.1
Peptide/nickel transport system permease protein.
 
 0.997
SEP62428.1
Peptide/nickel transport system substrate-binding protein.
  0.971
SEP62339.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.968
SEQ91147.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.949
SEP85157.1
Peptide/nickel transport system permease protein.
 
 0.900
SEP93933.1
Binding-protein-dependent transport system inner membrane component.
 
 0.900
SEQ91221.1
Peptide/nickel transport system permease protein.
 
 0.899
SEQ38453.1
Peptide/nickel transport system permease protein.
 
 0.895
SEQ26626.1
Peptide/nickel transport system permease protein.
 
 0.891
SEQ91173.1
Oligopeptide transport system ATP-binding protein.
 
 0.876
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.