STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP76488.1Nitronate monooxygenase. (328 aa)    
Predicted Functional Partners:
SEP95190.1
Acyl transferase domain-containing protein.
  
 
 0.958
SEQ97811.1
MFS transporter, NNP family, nitrate/nitrite transporter.
  
 
 0.870
SEQ97701.1
Nitrate reductase gamma subunit.
    
  0.845
SEQ97760.1
Respiratory nitrate reductase beta subunit.
    
  0.844
SEP76398.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 
 0.834
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.827
SEP76454.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase.
  
 
 0.811
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.805
SEQ64796.1
[acyl-carrier-protein] S-malonyltransferase.
  
 
 0.797
SEP76426.1
alpha-methylacyl-CoA racemase; Belongs to the CoA-transferase III family.
  
    0.706
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
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