STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP76553.1Cu+-exporting ATPase. (821 aa)    
Predicted Functional Partners:
SEQ53044.1
Cu+-exporting ATPase.
 
 
0.848
SEP76585.1
Copper chaperone.
 
 
 0.820
SEP76522.1
Cu(I)-responsive transcriptional regulator.
 
  
 0.806
SEQ53064.1
Cd2+/Zn2+-exporting ATPase.
 
 
0.670
SEQ66299.1
Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
 
  
 0.669
SEQ02928.1
Cu2+-exporting ATPase.
 
 
0.656
SEQ69639.1
Transcriptional regulator, ArsR family; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.645
SEQ55457.1
Hypothetical protein NreA.
  
  
 0.637
SEQ92130.1
Hypothetical protein NreA.
  
  
 0.637
SEP95790.1
PAS domain S-box-containing protein.
     
 0.633
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.