STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP81741.1Putative hemolysin. (277 aa)    
Predicted Functional Partners:
SEP81919.1
Two-component system, OmpR family, sensor histidine kinase ChvG.
 
     0.684
SEP81778.1
Phosphocarrier protein.
       0.640
SEP81818.1
PTS system, mannose-specific IIA component.
       0.639
SEQ60594.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
     0.620
SEP81846.1
UPF0042 nucleotide-binding protein; Displays ATPase and GTPase activities.
       0.619
SEP81883.1
Hpr(Ser) kinase/phosphatase.
       0.617
SEQ39105.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
     0.584
SEP81937.1
Two component transcriptional regulator, winged helix family.
       0.530
SEQ60623.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.506
SEQ41021.1
Paraquat-inducible protein A.
  
     0.481
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.