Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP56183.1 | SEP73504.1 | SAMN04488092_101152 | SAMN04488092_10261 | Competence protein ComEC. | DNA protecting protein DprA. | 0.798 |
SEP56183.1 | SEQ11577.1 | SAMN04488092_101152 | SAMN04488092_104114 | Competence protein ComEC. | Magnesium chelatase family protein. | 0.572 |
SEP56183.1 | SEQ29669.1 | SAMN04488092_101152 | SAMN04488092_105186 | Competence protein ComEC. | Hypothetical protein. | 0.555 |
SEP56183.1 | SEQ87762.1 | SAMN04488092_101152 | SAMN04488092_11574 | Competence protein ComEC. | Predicted amidophosphoribosyltransferases. | 0.761 |
SEP56183.1 | fliP | SAMN04488092_101152 | SAMN04488092_103288 | Competence protein ComEC. | Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. | 0.507 |
SEP56183.1 | recA | SAMN04488092_101152 | SAMN04488092_101477 | Competence protein ComEC. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.499 |
SEP73504.1 | SEP56183.1 | SAMN04488092_10261 | SAMN04488092_101152 | DNA protecting protein DprA. | Competence protein ComEC. | 0.798 |
SEP73504.1 | SEP94211.1 | SAMN04488092_10261 | SAMN04488092_10361 | DNA protecting protein DprA. | Flagellar hook-associated protein 1 FlgK. | 0.697 |
SEP73504.1 | SEQ01325.1 | SAMN04488092_10261 | SAMN04488092_103282 | DNA protecting protein DprA. | Hypothetical protein. | 0.727 |
SEP73504.1 | SEQ11577.1 | SAMN04488092_10261 | SAMN04488092_104114 | DNA protecting protein DprA. | Magnesium chelatase family protein. | 0.810 |
SEP73504.1 | SEQ25897.1 | SAMN04488092_10261 | SAMN04488092_10577 | DNA protecting protein DprA. | Transcriptional regulator, MarR family. | 0.833 |
SEP73504.1 | SEQ29669.1 | SAMN04488092_10261 | SAMN04488092_105186 | DNA protecting protein DprA. | Hypothetical protein. | 0.849 |
SEP73504.1 | SEQ87762.1 | SAMN04488092_10261 | SAMN04488092_11574 | DNA protecting protein DprA. | Predicted amidophosphoribosyltransferases. | 0.917 |
SEP73504.1 | fliP | SAMN04488092_10261 | SAMN04488092_103288 | DNA protecting protein DprA. | Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. | 0.826 |
SEP73504.1 | recA | SAMN04488092_10261 | SAMN04488092_101477 | DNA protecting protein DprA. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.698 |
SEP73504.1 | topA | SAMN04488092_10261 | SAMN04488092_10262 | DNA protecting protein DprA. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.949 |
SEP94211.1 | SEP73504.1 | SAMN04488092_10361 | SAMN04488092_10261 | Flagellar hook-associated protein 1 FlgK. | DNA protecting protein DprA. | 0.697 |
SEP94211.1 | SEQ01325.1 | SAMN04488092_10361 | SAMN04488092_103282 | Flagellar hook-associated protein 1 FlgK. | Hypothetical protein. | 0.985 |
SEP94211.1 | SEQ25897.1 | SAMN04488092_10361 | SAMN04488092_10577 | Flagellar hook-associated protein 1 FlgK. | Transcriptional regulator, MarR family. | 0.598 |
SEP94211.1 | SEQ87762.1 | SAMN04488092_10361 | SAMN04488092_11574 | Flagellar hook-associated protein 1 FlgK. | Predicted amidophosphoribosyltransferases. | 0.584 |
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