STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP95530.1Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family. (459 aa)    
Predicted Functional Partners:
SEP95492.1
Hypothetical protein.
 0.972
SEP95565.1
L-glutamine synthetase.
 
 
  0.949
SEP95683.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
     0.880
SEP98281.1
Glutamate synthase (NADPH) large subunit.
  
 
 0.870
SEP95618.1
TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein.
 
     0.868
SEP95757.1
Transcriptional regulator, RpiR family.
 
 
  0.840
SEP95190.1
Acyl transferase domain-containing protein.
    
 0.817
SEP95714.1
Predicted N-formylglutamate amidohydrolase.
 
     0.814
SEP95649.1
TRAP transporter, DctM subunit.
 
     0.802
SEP54808.1
L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
 
0.755
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
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