STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP95925.1Serine/threonine protein kinase. (344 aa)    
Predicted Functional Partners:
SEP95190.1
Acyl transferase domain-containing protein.
   
 0.787
SEQ46542.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 0.723
SEQ87288.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 0.723
SEP93642.1
3-hydroxy-3-methylglutaryl CoA synthase.
  
 
 0.718
SEP95955.1
Aldehyde dehydrogenase (NAD+).
  
  0.711
SEP55987.1
Indolepyruvate ferredoxin oxidoreductase.
  
 
 0.689
SEP76398.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 
 0.636
SEP84504.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.636
SEQ46846.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 
 0.636
SEQ59328.1
Enoyl-CoA hydratase/carnithine racemase.
  
 
 0.636
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
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