STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP92623.1Glycosyl transferase family 2. (328 aa)    
Predicted Functional Partners:
SEP92645.1
Core-2/I-Branching enzyme.
 
   
 0.932
SEP92670.1
Hypothetical protein.
 
     0.925
SEP97722.1
Sulfotransferase family protein.
 
 
 0.826
SEP95120.1
Natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
 
 
 0.823
SEQ88253.1
ABC-type polysaccharide/polyol phosphate export permease.
 
  
 0.793
SEQ11221.1
Capsular polysaccharide transport system ATP-binding protein.
 
  
 0.788
SEQ83788.1
Hypothetical protein.
  
 
   0.786
SEQ11258.1
Capsular polysaccharide transport system permease protein.
 
    0.771
SEQ99148.1
Hypothetical protein.
 
     0.771
SEQ89911.1
Capsular polysaccharide export protein.
 
   
 0.769
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.