STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP94874.1Predicted dehydrogenase. (374 aa)    
Predicted Functional Partners:
SEP94907.1
Nucleoside-diphosphate-sugar epimerase.
 
 
 0.963
SEP94940.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
 0.946
SEP94964.1
Glycosyltransferase, GT2 family.
 
     0.936
SEQ39105.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.861
SEQ60594.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.861
SEQ00119.1
Myo-inositol-1(or 4)-monophosphatase.
    
 0.851
SEP94993.1
Predicted dehydrogenase.
 
 
0.847
SEQ45225.1
Myo-inositol-1(or 4)-monophosphatase.
    
 0.847
SEQ82288.1
Vanillate O-demethylase ferredoxin subunit.
    
 0.831
SER05411.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.831
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.