STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ18379.1Chaperone required for the assembly of the F1-ATPase. (238 aa)    
Predicted Functional Partners:
SEQ18410.1
Phosphoglycolate phosphatase.
      0.928
SEQ18444.1
Ribosomal large subunit pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
 
     0.904
crcB
CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
       0.856
SER01414.1
NADH:ubiquinone oxidoreductase subunit.
  
     0.732
SEQ87746.1
Methyltransferase domain-containing protein.
  
     0.692
SEQ18498.1
Recombination protein MgsA.
       0.679
SEQ18352.1
General L-amino acid transport system substrate-binding protein.
       0.664
SEQ37448.1
Cobaltochelatase CobT subunit.
  
     0.637
SEQ60903.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.612
SEQ09435.1
ETC complex I subunit conserved region.
  
     0.592
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.