STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ09788.1Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family. (364 aa)    
Predicted Functional Partners:
SEQ09814.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.996
SEQ09759.1
Nucleoside ABC transporter ATP-binding protein.
 
 0.986
SEQ09722.1
Nucleoside-binding protein.
 
 
 0.984
SEP63337.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.948
SEQ49189.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.947
SEQ44313.1
Nucleoside ABC transporter ATP-binding protein.
 
 0.942
SEP63408.1
Nucleoside ABC transporter ATP-binding protein.
 
 0.940
SEQ49244.1
Nucleoside ABC transporter ATP-binding protein.
 
 0.938
SEQ44289.1
Nucleoside-binding protein.
 
 
 0.918
SEQ44382.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.851
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
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