STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ29474.1Hint domain-containing protein. (367 aa)    
Predicted Functional Partners:
SEP78012.1
acyl-CoA thioesterase-1.
  
 0.938
SEP96238.1
Hemolysin-type calcium-binding repeat-containing protein.
  
 0.880
SEQ76197.1
Hemolysin-type calcium-binding repeat-containing protein.
  
 0.842
SEP92645.1
Core-2/I-Branching enzyme.
  
     0.745
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.716
SEP92623.1
Glycosyl transferase family 2.
  
     0.715
SEQ99981.1
Hypothetical protein.
  
     0.693
SEP77712.1
Pectate lyase superfamily protein.
  
 
 0.680
SEP92597.1
Glycosyl transferase family 2.
  
     0.678
SEQ61453.1
Hypothetical protein.
  
     0.665
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.