STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ41461.1Xanthine dehydrogenase accessory factor. (321 aa)    
Predicted Functional Partners:
SEQ41493.1
Molybdenum cofactor cytidylyltransferase.
 
  
 0.947
SEP56692.1
CTP:molybdopterin cytidylyltransferase MocA.
 
 
 0.927
SEP76718.1
CO or xanthine dehydrogenase, Mo-binding subunit.
 
 0.924
SEQ37954.1
Isoquinoline 1-oxidoreductase, alpha subunit.
 
 
 0.866
SEQ41555.1
Carbon-monoxide dehydrogenase small subunit.
 
 
 0.849
SEQ37927.1
Isoquinoline 1-oxidoreductase, beta subunit.
 
 
 0.842
SEQ36539.1
Carbon-monoxide dehydrogenase large subunit.
 
 
 0.837
SEP76754.1
CO or xanthine dehydrogenase, FAD-binding subunit.
 
 
 0.824
SER11254.1
Carbon-monoxide dehydrogenase large subunit.
 
 
 0.808
SEQ41425.1
Hypothetical protein.
 
     0.756
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
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