STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ52820.1Uncharacterized copper-binding protein, cupredoxin-like subfamily. (177 aa)    
Predicted Functional Partners:
SEQ52726.1
Outer membrane protein TolC.
 
 
 0.908
SEQ52851.1
ABC transporter transmembrane region.
 
     0.895
SEQ52887.1
Cytochrome c.
 
     0.881
SEQ52761.1
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA).
 
   
 0.855
SEQ52918.1
Hypothetical protein.
 
     0.791
SEQ55858.1
Hypothetical protein.
  
     0.603
SEQ52788.1
Uncharacterized copper-binding protein, cupredoxin-like subfamily.
 
    
0.581
SEQ55608.1
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA).
 
   
 0.503
SEQ52946.1
Cu(I)/Ag(I) efflux system membrane protein CusA/SilA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.498
SEQ23882.1
Carboxypeptidase regulatory-like domain-containing protein.
  
     0.496
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
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