STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ51823.1Cu2+-exporting ATPase. (788 aa)    
Predicted Functional Partners:
SEQ51852.1
Uncharacterized membrane protein YfcC, ion transporter superfamily.
       0.727
arcA
Arginine deiminase.
       0.657
SEP76553.1
Cu+-exporting ATPase.
 
 
0.628
SEQ51902.1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
     
 0.601
SEQ51934.1
Carbamate kinase; Belongs to the carbamate kinase family.
       0.594
SEP76585.1
Copper chaperone.
  
 
 0.586
SEQ56082.1
Copper chaperone.
  
 
 0.586
SEQ51963.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
       0.555
SEQ52582.1
Protein-S-isoprenylcysteine O-methyltransferase Ste14.
     0.472
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.