Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP54903.1 | SEQ60342.1 | SAMN04488092_10121 | SAMN04488092_10976 | Gentisate 1,2-dioxygenase. | Rieske [2Fe-2S] domain-containing protein. | 0.446 |
SEP54903.1 | SEQ79560.1 | SAMN04488092_10121 | SAMN04488092_11370 | Gentisate 1,2-dioxygenase. | 4-hydroxybenzoyl-CoA thioesterase. | 0.679 |
SEP94874.1 | SEQ60342.1 | SAMN04488092_10385 | SAMN04488092_10976 | Predicted dehydrogenase. | Rieske [2Fe-2S] domain-containing protein. | 0.462 |
SEP94874.1 | SEQ82288.1 | SAMN04488092_10385 | SAMN04488092_11426 | Predicted dehydrogenase. | Vanillate O-demethylase ferredoxin subunit. | 0.831 |
SEQ59270.1 | SEQ60342.1 | SAMN04488092_10937 | SAMN04488092_10976 | Phenylpropionate dioxygenase, large terminal subunit. | Rieske [2Fe-2S] domain-containing protein. | 0.504 |
SEQ59270.1 | SEQ82288.1 | SAMN04488092_10937 | SAMN04488092_11426 | Phenylpropionate dioxygenase, large terminal subunit. | Vanillate O-demethylase ferredoxin subunit. | 0.952 |
SEQ60228.1 | SEQ60342.1 | SAMN04488092_10972 | SAMN04488092_10976 | Transcriptional regulator, IclR family. | Rieske [2Fe-2S] domain-containing protein. | 0.446 |
SEQ60342.1 | SEP54903.1 | SAMN04488092_10976 | SAMN04488092_10121 | Rieske [2Fe-2S] domain-containing protein. | Gentisate 1,2-dioxygenase. | 0.446 |
SEQ60342.1 | SEP94874.1 | SAMN04488092_10976 | SAMN04488092_10385 | Rieske [2Fe-2S] domain-containing protein. | Predicted dehydrogenase. | 0.462 |
SEQ60342.1 | SEQ59270.1 | SAMN04488092_10976 | SAMN04488092_10937 | Rieske [2Fe-2S] domain-containing protein. | Phenylpropionate dioxygenase, large terminal subunit. | 0.504 |
SEQ60342.1 | SEQ60228.1 | SAMN04488092_10976 | SAMN04488092_10972 | Rieske [2Fe-2S] domain-containing protein. | Transcriptional regulator, IclR family. | 0.446 |
SEQ60342.1 | SEQ60371.1 | SAMN04488092_10976 | SAMN04488092_10977 | Rieske [2Fe-2S] domain-containing protein. | Glutamine synthetase. | 0.865 |
SEQ60342.1 | SEQ60396.1 | SAMN04488092_10976 | SAMN04488092_10978 | Rieske [2Fe-2S] domain-containing protein. | 5-carboxymethyl-2-hydroxymuconate isomerase. | 0.671 |
SEQ60342.1 | SEQ79512.1 | SAMN04488092_10976 | SAMN04488092_11368 | Rieske [2Fe-2S] domain-containing protein. | benzoate-CoA ligase. | 0.463 |
SEQ60342.1 | SEQ79536.1 | SAMN04488092_10976 | SAMN04488092_11369 | Rieske [2Fe-2S] domain-containing protein. | 2-polyprenyl-6-methoxyphenol hydroxylase. | 0.594 |
SEQ60342.1 | SEQ79560.1 | SAMN04488092_10976 | SAMN04488092_11370 | Rieske [2Fe-2S] domain-containing protein. | 4-hydroxybenzoyl-CoA thioesterase. | 0.698 |
SEQ60342.1 | SEQ82288.1 | SAMN04488092_10976 | SAMN04488092_11426 | Rieske [2Fe-2S] domain-containing protein. | Vanillate O-demethylase ferredoxin subunit. | 0.848 |
SEQ60371.1 | SEQ60342.1 | SAMN04488092_10977 | SAMN04488092_10976 | Glutamine synthetase. | Rieske [2Fe-2S] domain-containing protein. | 0.865 |
SEQ60371.1 | SEQ60396.1 | SAMN04488092_10977 | SAMN04488092_10978 | Glutamine synthetase. | 5-carboxymethyl-2-hydroxymuconate isomerase. | 0.827 |
SEQ60371.1 | SEQ82288.1 | SAMN04488092_10977 | SAMN04488092_11426 | Glutamine synthetase. | Vanillate O-demethylase ferredoxin subunit. | 0.482 |
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