STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ69450.1Hypothetical protein. (333 aa)    
Predicted Functional Partners:
SEQ69422.1
Cation transport protein ChaC; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
       0.729
SEP79347.1
Hypothetical protein.
  
     0.680
SEQ69399.1
Hypothetical protein.
       0.642
SEQ69373.1
Chemotaxis protein MotB.
 
     0.628
SEQ46755.1
Hypothetical protein.
  
     0.565
SEP92821.1
Lipopolysaccharide export system protein LptC.
  
     0.485
SEQ09571.1
Hypothetical protein.
  
     0.461
SEP84624.1
Uncharacterized domain 1-containing protein.
  
     0.413
SEQ74136.1
Acetyltransferase (GNAT) family protein.
  
     0.413
SEQ27898.1
Haem-NO-binding.
  
     0.409
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.