STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ74938.1Spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (365 aa)    
Predicted Functional Partners:
SEQ74902.1
Spermidine/putrescine transport system substrate-binding protein.
 
 0.966
SEQ74838.1
Spermidine/putrescine transport system permease protein.
 0.950
SEQ74862.1
Spermidine/putrescine transport system permease protein.
 
 
 0.947
SEP72473.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 
 0.924
SEQ74968.1
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.849
SEQ09115.1
Spermidine/putrescine transport system permease protein.
 
 0.836
SEQ09092.1
Spermidine/putrescine transport system permease protein.
 0.818
SEP99121.1
Putative spermidine/putrescine transport system permease protein.
 
 0.798
SEQ75021.1
Acetyltransferase (GNAT) family protein.
 
     0.781
SEQ75101.1
Glycine/D-amino acid oxidase.
 
    0.781
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
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