STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ75695.1Long-chain acyl-CoA synthetase. (657 aa)    
Predicted Functional Partners:
SEQ75726.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
    0.952
SEQ75840.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
    0.887
SEQ75809.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
    0.885
SEQ75752.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
    0.884
SEQ75659.1
Hypothetical protein.
 
  
  0.871
SEQ75901.1
phenylacetate-CoA ligase.
 
    0.837
SEQ75869.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
    0.826
SEP95190.1
Acyl transferase domain-containing protein.
   
 0.729
SEQ17629.1
Hypothetical protein.
    
  0.721
SEP81598.1
Hypothetical protein.
     
 0.720
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
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