STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ83447.1Phytochelatin synthase. (64 aa)    
Predicted Functional Partners:
SEQ02714.1
Cytochrome c oxidase cbb3-type subunit 2.
  
 0.947
SEQ02686.1
Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 0.943
SEP96928.1
Sulfide:quinone oxidoreductase.
   
 0.894
SER01506.1
Sulfur dehydrogenase subunit SoxD.
  
 
 0.791
SEP78522.1
Sulfide:quinone oxidoreductase.
   
 0.751
SEQ66353.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
   
 0.751
SEQ90163.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
   
 0.751
SEQ17451.1
Hypothetical protein.
  
 0.642
SEQ02743.1
Cytochrome c oxidase cbb3-type subunit 4.
  
 
 0.507
SEQ70199.1
Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.475
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.