STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ83788.1Hypothetical protein. (403 aa)    
Predicted Functional Partners:
SEQ83759.1
Cytochrome P450.
 
  0.964
SEP92623.1
Glycosyl transferase family 2.
  
 
   0.786
SEP92597.1
Glycosyl transferase family 2.
  
 
   0.785
SEQ89911.1
Capsular polysaccharide export protein.
 
     0.781
SEP97757.1
Core-2/I-Branching enzyme.
  
 
   0.775
SEP92645.1
Core-2/I-Branching enzyme.
  
     0.768
SEP92670.1
Hypothetical protein.
  
     0.768
SEP97722.1
Sulfotransferase family protein.
  
     0.766
SEQ99981.1
Hypothetical protein.
  
     0.764
SEQ99148.1
Hypothetical protein.
  
     0.763
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.