STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ83927.1Two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB. (589 aa)    
Predicted Functional Partners:
SEP95790.1
PAS domain S-box-containing protein.
0.993
SEQ17629.1
Hypothetical protein.
0.992
SEQ18074.1
PAS/PAC sensor hybrid histidine kinase.
0.989
SEQ23631.1
PAS domain S-box-containing protein.
0.989
SEQ84394.1
PAS domain S-box-containing protein.
0.989
SEQ83901.1
DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.
 0.981
SEQ74261.1
His Kinase A (phospho-acceptor) domain-containing protein.
 0.950
SEQ58373.1
PAS domain S-box-containing protein.
 
0.949
SEQ75659.1
Hypothetical protein.
 
 0.818
SEP64793.1
Two-component system, cell cycle sensor histidine kinase and response regulator CckA.
 
 
0.807
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.