STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ91106.13',5'-cyclic AMP phosphodiesterase CpdA. (272 aa)    
Predicted Functional Partners:
SEP95790.1
PAS domain S-box-containing protein.
  
 
 0.904
SEQ39699.1
Hypothetical protein.
    
 0.882
SEQ18074.1
PAS/PAC sensor hybrid histidine kinase.
   
 
 0.808
SEQ23631.1
PAS domain S-box-containing protein.
   
 
 0.808
SEQ84394.1
PAS domain S-box-containing protein.
   
 
 0.808
SEP98088.1
AAA ATPase domain-containing protein.
    
 0.801
SEQ74261.1
His Kinase A (phospho-acceptor) domain-containing protein.
  
 
 0.784
amn
AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.
  
  
  0.760
SEQ17629.1
Hypothetical protein.
  
 
 0.748
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
    
  0.723
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
Server load: low (16%) [HD]