STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ91381.1Spermidine/putrescine transport system substrate-binding protein. (373 aa)    
Predicted Functional Partners:
SEQ91450.1
Spermidine/putrescine transport system permease protein.
 
 
 0.963
SEQ91428.1
Spermidine/putrescine transport system permease protein.
 
 
 0.960
SEQ91405.1
Spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.952
SEQ09092.1
Spermidine/putrescine transport system permease protein.
 
 
 0.870
SEQ09115.1
Spermidine/putrescine transport system permease protein.
 
 
 0.868
SEP98715.1
Putrescine transport system permease protein.
 
 
 0.863
SEP99121.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.839
SEP98751.1
Putrescine transport system permease protein.
 
 
 0.837
SEQ74862.1
Spermidine/putrescine transport system permease protein.
 
 
 0.771
potA
Putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.744
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.