SEQ99540.1 protein (Litorimicrobium taeanense)

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Predicted Interactions

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Score

SEQ99540.1

Heat shock protein Hsp15. (120 aa)

Predicted Functional Partners:

rplS

0.970

rpmB

0.965

rplQ

0.963

rpmG

0.963

rpmH

0.960

rpoC

0.959

rplM

0.956

rplU

0.956

rpmF

0.956

rpmI

0.956

Your Current Organism:

Litorimicrobium taeanense

NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SEQ99540.1	rplM	SAMN04488092_11916	SAMN04488092_101347	Heat shock protein Hsp15.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.956
SEQ99540.1	rplQ	SAMN04488092_11916	SAMN04488092_104332	Heat shock protein Hsp15.	LSU ribosomal protein L17P.	0.963
SEQ99540.1	rplS	SAMN04488092_11916	SAMN04488092_104180	Heat shock protein Hsp15.	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.970
SEQ99540.1	rplU	SAMN04488092_11916	SAMN04488092_101378	Heat shock protein Hsp15.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.956
SEQ99540.1	rpmB	SAMN04488092_11916	SAMN04488092_104133	Heat shock protein Hsp15.	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	0.965
SEQ99540.1	rpmF	SAMN04488092_11916	SAMN04488092_10189	Heat shock protein Hsp15.	Large subunit ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.956
SEQ99540.1	rpmG	SAMN04488092_11916	SAMN04488092_10737	Heat shock protein Hsp15.	LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family.	0.963
SEQ99540.1	rpmH	SAMN04488092_11916	SAMN04488092_103297	Heat shock protein Hsp15.	LSU ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family.	0.960
SEQ99540.1	rpmI	SAMN04488092_11916	SAMN04488092_103367	Heat shock protein Hsp15.	LSU ribosomal protein L35P; Belongs to the bacterial ribosomal protein bL35 family.	0.956
SEQ99540.1	rpoC	SAMN04488092_11916	SAMN04488092_103379	Heat shock protein Hsp15.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.959
rplM	SEQ99540.1	SAMN04488092_101347	SAMN04488092_11916	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Heat shock protein Hsp15.	0.956
rplM	rplQ	SAMN04488092_101347	SAMN04488092_104332	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L17P.	0.999
rplM	rplS	SAMN04488092_101347	SAMN04488092_104180	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.998
rplM	rplU	SAMN04488092_101347	SAMN04488092_101378	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.999
rplM	rpmB	SAMN04488092_101347	SAMN04488092_104133	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	0.997
rplM	rpmF	SAMN04488092_101347	SAMN04488092_10189	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Large subunit ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.997
rplM	rpmG	SAMN04488092_101347	SAMN04488092_10737	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family.	0.997
rplM	rpmH	SAMN04488092_101347	SAMN04488092_103297	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family.	0.995
rplM	rpmI	SAMN04488092_101347	SAMN04488092_103367	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L35P; Belongs to the bacterial ribosomal protein bL35 family.	0.997
rplM	rpoC	SAMN04488092_101347	SAMN04488092_103379	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999