STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER01386.1phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. (152 aa)    
Predicted Functional Partners:
SEQ41045.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.999
SEQ41080.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.999
SEQ74684.1
Phospholipid transport system substrate-binding protein.
 
 0.994
SEQ70491.1
Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
  0.978
SEP94266.1
Chemotaxis protein MotB.
   
   0.858
SEQ69373.1
Chemotaxis protein MotB.
   
   0.858
SER01359.1
Hypothetical protein.
       0.856
SER01414.1
NADH:ubiquinone oxidoreductase subunit.
     
 0.853
SEQ74654.1
Phospholipid-binding lipoprotein MlaA.
 
   
 0.833
clpX
ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
       0.614
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.