STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER02104.1Protein of unknown function. (239 aa)    
Predicted Functional Partners:
SER02081.1
Hypothetical protein.
 
   
 0.928
SEP77946.1
Small redox-active disulfide protein 2.
   
 0.852
SEP78715.1
Thiol-disulfide isomerase or thioredoxin.
   
 0.852
SEQ65581.1
Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE.
   
 0.852
SER02135.1
Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family.
       0.738
SER02164.1
DNA transformation protein.
       0.691
SEQ10633.1
Glycosyl transferase family 2.
  
 
   0.617
SER02032.1
FeS assembly SUF system protein.
       0.501
SEQ28865.1
Alpha/beta hydrolase of unknown function.
  
     0.476
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.