STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER04749.1GSCFA family protein. (365 aa)    
Predicted Functional Partners:
SER04778.1
Hypothetical protein.
       0.796
SER04686.1
Hypothetical protein.
 
    0.662
SER04717.1
Protein of unknown function.
       0.658
SEP55871.1
Hypothetical protein.
   
 0.561
SEQ29474.1
Hint domain-containing protein.
   
 0.561
SEQ66138.1
Leishmanolysin.
   
 0.561
SER04819.1
Hypothetical protein.
       0.553
SEQ52918.1
Hypothetical protein.
  
 
  0.551
SEP77712.1
Pectate lyase superfamily protein.
  
 0.550
SEQ64417.1
Phage conserved hypothetical protein, phiE125 gp8 family.
  
 0.550
Your Current Organism:
Litorimicrobium taeanense
NCBI taxonomy Id: 657014
Other names: DSM 22007, KACC 13706, L. taeanense, Litorimicrobium taeanense Jin et al. 2011, Phaeobacter sp. G4, strain G4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.