Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT04164Rho-related protein racA. (594 aa)    
Predicted Functional Partners:
KP79_PYT03917
Rho-related protein racA.
  
  
 
0.903
KP79_PYT04166
Rho-related protein racA.
  
  
 
0.901
KP79_PYT26112
Kelch-like ECH-associated protein 1.
    
  0.900
KP79_PYT04201
Influenza virus NS1A-binding protein-like.
    
  0.900
KP79_PYT25248
Kelch-like protein 13.
    
  0.900
KP79_PYT26208
Kelch-like protein 9.
    
  0.900
KP79_PYT09554
Kelch-like protein 10.
    
  0.900
KP79_PYT20805
Cullin-3-A; Belongs to the cullin family.
    
 0.871
KP79_PYT24141
Kalirin.
    
 0.866
KP79_PYT05670
COP9 signalosome complex subunit 1.
    
  0.775
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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