Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT04179Homeobox protein abdominal-B. (260 aa)    
Predicted Functional Partners:
KP79_PYT04089
Pre-B-cell leukemia transcription factor 2.
    
 
 0.686
KP79_PYT16179
Homeobox protein ceh-40.
    
 
 0.686
KP79_PYT09351
Homeobox protein Meis2.
    
 
 0.579
KP79_PYT17920
Importin-7.
    
   0.576
KP79_PYT10182
Bone morphogenetic protein 2.
      
 0.519
KP79_PYT17429
Mushroom body large-type Kenyon cell-specific protein 1.
    
 
 0.464
KP79_PYT04180
Homeobox protein Hox-C11.
   
 
 0.459
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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