Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KP79_PYT03457Angiopoietin-4. (123 aa)    
Predicted Functional Partners:
KP79_PYT24527
Angiopoietin-related protein 1.
  
     0.527
KP79_PYT24628
Angiopoietin-related protein 1.
  
     0.523
KP79_PYT18938
Angiopoietin-related protein 1.
  
     0.511
KP79_PYT26056
Angiopoietin-related protein 1.
  
     0.507
KP79_PYT16242
Tenascin-X.
  
     0.502
KP79_PYT19657
Angiopoietin-related protein 6.
  
     0.495
KP79_PYT26393
Ficolin-3.
  
     0.488
KP79_PYT16452
Fibroleukin.
  
     0.473
KP79_PYT04275
Fibrinogen-like protein A.
  
     0.461
KP79_PYT24718
Ficolin-1.
  
     0.455
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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