STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT03469Rho-related protein racA. (92 aa)    
Predicted Functional Partners:
KP79_PYT24141
Kalirin.
    
 0.782
KP79_PYT06651
Intersectin-1.
    
 0.736
KP79_PYT21242
Intersectin-1.
    
 0.736
KP79_PYT12487
Intersectin-2.
    
 0.736
KP79_PYT20805
Cullin-3-A; Belongs to the cullin family.
    
 0.711
KP79_PYT15622
Unconventional myosin-IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.711
KP79_PYT14043
Salivary glue protein Sgs-4.
   
 0.696
KP79_PYT12509
SH3 domain-containing RING finger protein 3.
    
 0.612
KP79_PYT06175
Rho GDP-dissociation inhibitor 2.
   
 0.598
KP79_PYT25912
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.592
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.