STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KP79_PYT24815Estrogen receptor. (175 aa)    
Predicted Functional Partners:
KP79_PYT23982
Nuclear receptor coactivator 2.
    
 0.808
KP79_PYT12368
CREB-binding protein.
    
 0.737
KP79_PYT19244
Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 0.714
KP79_PYT10196
Heat shock protein HSP 90-alpha 1.
    
 0.686
KP79_PYT24484
Receptor protein-tyrosine kinase.
    
 0.674
KP79_PYT19741
CS domain-containing protein.
   
 0.660
KP79_PYT09011
ATPase family AAA domain-containing protein 2B.
    
 0.653
KP79_PYT19729
Breast cancer type 1 susceptibility protein-like.
    
 
 0.642
KP79_PYT06569
Nuclear receptor corepressor 1.
    
 0.634
KP79_PYT10577
Striatin-3.
    
 0.631
Your Current Organism:
Mizuhopecten yessoensis
NCBI taxonomy Id: 6573
Other names: M. yessoensis, Patinopecten yessoensis, Patiopecten yessoensis, Yesso scallop, ezo giant scallop
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